From: ironjustice on
Discovery offers new understanding of diabetes drug target
September 26, 2008

Team from University of Leicester reveal how the protein PPAR gamma
binds to 8 fatty acids

Scientists at the University of Leicester have published findings
about a new advance in the study of major diabetes drug target.

The advance - described by the researchers as 'very significant' -
could lead to new drugs being developed to target a protein that plays
a critical role in controlling the way the body breaks down sugar.

Professor John Schwabe and his team from the University of Leicester
Department of Biochemistry (together with teams from Japan and
Hungary) have been studying the protein, PPAR gamma. PPAR gamma is a
major drug target for the treatment of type 2 diabetes. Although it
was known how drugs are able to activate this protein, until this
study, using the sophisticated technique of X-ray Crystallography, it
was not clear how PPAR gamma is naturally activated in the body.

X-ray Crystallography is the principal method by which the detailed 3-
dimensional structures of molecules - especially the molecules of
living systems - have been discovered. It is achieved by firing X-rays
at the target and creating its structures by analysing how the x-rays
scatter into many different directions.

Through this method, the Leicester team have shown how PPAR gamma
binds to eight different fatty acids, derived in part from what we
eat. They found that many of these acids joined irreversibly with the
protein and led to its long term activation. They have also shown that
sometimes two fatty acids bind simultaneously, which might mean that
PPAR gamma could be targeted by a mixture of drugs.

Professor John Schwabe, who led the Leicester project with his team,
including Dr Toshimasa Itoh and Dr Louise Fairall, said: "The finding
that natural activators for PPAR gamma couple irreversibly to the PPAR
gamma receptor dramatically changes our understanding of how this
receptor is activated.

"It may also allow for the design of novel pharmaceuticals that give
longer term activation of PPAR gamma, at lower doses, without some of
the side effects of the current generation of drugs."

Professor Schwabe said: "PPAR gamma is a critical player in the
increasingly prevalent metabolic disease of type 2 diabetes which
affects more than 180 million people worldwide (World Health
Organisisation) and in the UK alone costs the NHS £9.6 million every
day.

"PPARgamma is activated by two widely prescribed anti-diabetic
insulin- sensitising drugs, Actos and Avandia. However the identity of
the natural activators for PPAR gamma has remained unclear.

"Our breakthrough is important because it reveals for the first time
that how this protein is activated by naturally-occuring fatty acids.
This knowledge will help in the design of future novel pharmaceutical
agents."

University of Leicester


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Tom


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http://tinyurl.com/2r2nkh


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DEAD PEOPLE WALKING
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From: ironjustice on
On Sep 27, 4:46 pm, "ironjust...(a)aol.com" <ironjust...(a)aol.com>
wrote:Team from University of Leicester reveal how the protein PPAR
gamma binds to 8 fatty acids <<

http://tinyurl.com/3gc6s8

Therefore, this hypothesis bridges the concept of natural PPAR
agonists and the use of structural information in designing new drugs
against diabetes and metabolic syndrome.
The derivatives may also be used as anti-inflammatory and anticancer
agents.

PMID: 18355413
-----------------------

Sci. STKE, 28 November 2006
Vol. 2006, Issue 363, p. tw401
[DOI: 10.1126/stke.3632006tw401]

EDITORS' CHOICE
Immunology
Nitrated Fatty Acids as Signaling Molecules
L. Bryan Ray

Science, Science’s STKE, AAAS, Washington, DC 20005, USA

Some fatty acid derivatives, like prostaglandins and thromboxanes, are
well known signaling molecules.
A more recently recognized, related class of molecules that could have
similar functions includes the nitration products of unsaturated fatty
acids (nitroalkenes) formed in nitric oxide (NO)-dependent oxidative
reactions.
In particular, the nitroalkene derivatives of linoleic acid (LNO2) and
oleic acid (OA-NO2) are found in human plasma and are thought to
regulate physiological functions in multiple cell types.
Rather than binding to receptors, though, these molecules are proposed
to act by mediating reversible nitroalkylation of glutathione or of
Cys or His residues of proteins.
Cui et al. now report experiments indicating that LNO2 and OA-NO2 may
function as antiinflammatory agents.
The authors applied concentrations of LNO2 and OA-NO2 similar to those
found in human blood to cultured mouse macrophages and observed dose-
dependent decreases in lipopolysaccharide (LPS)-induced cytokine
secretion by the cells. The transcription factor NF-B has a central
role in inflammatory responses, and treatment of macrophages with LNO2
or OA-NO2 decreased activation of the transcription factor in response
to LPS.
Experiments with biotinylated LNO2, OA-NO2, LA (linoleic acid), and OA
indicated that LNO2 and OA-NO2, but not LA or OA, associated with the
p65 subunit of NF-B and appeared to modify p65 by covalent
nitroalkylation.
The nitroalkenes also inhibited adhesion of monocytes to endothelial
cells in culture.
The authors propose that nitroalkenes like LNO2 and OA-NO2 may prove
to be an important class of signaling molecules influencing
inflammatory processes.

T. Cui, F. J. Schopfer, J. Zhang, K. Chen, T. Ichikawa, P. R. S.
Baker, C. Batthyany, B. K. Chacko, X. Feng, R. P. Patel, A. Agarwal,
B. A. Freeman, Y. E. Chen, Nitrated fatty acids: Endogenous anti-
inflammatory signaling mediators. J. Biol. Chem. 281, 35686-35698
(2006). [Abstract] [Full Text]


Citation: L. B. Ray, Nitrated Fatty Acids as Signaling Molecules. Sci.
STKE 2006, tw401 (2006).


University of Leicester


Who loves ya.
Tom


Jesus Was A Vegetarian!
http://tinyurl.com/2r2nkh


Man Is A Herbivore!
http://tinyurl.com/a3cc3


DEAD PEOPLE WALKING
http://tinyurl.com/zk9fk




> Discovery offers new understanding of diabetes drug target
> September 26, 2008
>
> Team from University of Leicester reveal how the protein PPAR gamma
> binds to 8 fatty acids
>
> Scientists at the University of Leicester have published findings
> about a new advance in the study of major diabetes drug target.
>
> The advance - described by the researchers as 'very significant' -
> could lead to new drugs being developed to target a protein that plays
> a critical role in controlling the way the body breaks down sugar.
>
> Professor John Schwabe and his team from the University of Leicester
> Department of Biochemistry (together with teams from Japan and
> Hungary) have been studying the protein, PPAR gamma. PPAR gamma is a
> major drug target for the treatment of type 2 diabetes. Although it
> was known how drugs are able to activate this protein, until this
> study, using the sophisticated technique of X-ray Crystallography, it
> was not clear how PPAR gamma is naturally activated in the body.
>
> X-ray Crystallography is the principal method by which the detailed 3-
> dimensional structures of molecules - especially the molecules of
> living systems - have been discovered. It is achieved by firing X-rays
> at the target and creating its structures by analysing how the x-rays
> scatter into many different directions.
>
> Through this method, the Leicester team have shown how PPAR gamma
> binds to eight different fatty acids, derived in part from what we
> eat. They found that many of these acids joined irreversibly with the
> protein and led to its long term activation. They have also shown that
> sometimes two fatty acids bind simultaneously, which might mean that
> PPAR gamma could be targeted by a mixture of drugs.
>
> Professor John Schwabe, who led the Leicester project with his team,
> including Dr Toshimasa Itoh and Dr Louise Fairall, said: "The finding
> that natural activators for PPAR gamma couple irreversibly to the PPAR
> gamma receptor dramatically changes our understanding of how this
> receptor is activated.
>
> "It may also allow for the design of novel pharmaceuticals that give
> longer term activation of PPAR gamma, at lower doses, without some of
> the side effects of the current generation of drugs."
>
> Professor Schwabe said: "PPAR gamma is a critical player in the
> increasingly prevalent metabolic disease of type 2 diabetes which
> affects more than 180 million people worldwide (World Health
> Organisisation) and in the UK alone costs the NHS £9.6 million every
> day.
>
> "PPARgamma is activated by two widely prescribed anti-diabetic
> insulin- sensitising drugs, Actos and Avandia. However the identity of
> the natural activators for PPAR gamma has remained unclear.
>
> "Our breakthrough is important because it reveals for the first time
> that how this protein is activated by naturally-occuring fatty acids.
> This knowledge will help in the design of future novel pharmaceutical
> agents."
>
> University of Leicester
>
> Who loves ya.
> Tom
>
> Jesus Was A Vegetarian!http://tinyurl.com/2r2nkh
>
> Man Is A Herbivore!http://tinyurl.com/a3cc3
>
> DEAD PEOPLE WALKINGhttp://tinyurl.com/zk9fk

From: ironjustice on
On Sep 27, 9:14 pm, ironjustice <teamtan...(a)hotmail.com> wrote:the
concept of natural PPAR agonists <<

"Supplementation of flaxseed flour, a source of omega-3 fatty acids
for 2 weeks"

Systemic inflammation in morbidly obese subjects: response to oral
supplementation with alpha-linolenic acid
Alternative Medicine Review,
Sept, 2007 by J. Faintuch, L.M. Horie, H.V. Barbeiro
BACKGROUND:
Morbidly obese patients frequently display asymptomatic chronic
activation of acute phase response, with potentially adverse
metabolic
and cardiovascular consequences.
Nutritional preparations to improve this phenomenon have rarely been
administered. Aiming to investigate the supplementation of flaxseed
flour, a source of omega-3 fatty acids, a prospective randomized
double-blind cross-over study was
designed.
METHODS:
Outpatient obese subjects (n = 41) were clinically and biochemically
screened, and results for 24 randomized subjects are shown.
Age was 40.8 +/- 11.6 years (83.3% females) and body mass index (BMI)
was 47.1 +/- 7.2 kg/ [m.sup.2].
Flaxseed flour (Farinha de Linhaca Dourada
LinoLive, Cisbra, Brazil) in the amount of 30 g/day (5 g of
alphalinolenic acid - omega-3) and an equal mass of placebo (manioc
flour) were administered for 2 weeks each.
Variables included general biochemical investigation, white blood cell
count (WBC), C-reactive protein (CRP), serum amyloid A (SAA) and
fibronectin.
RESULTS:
No intolerance was registered.
Body weight and general biochemical indices remained stable.
Initial CRP and SAA were elevated (13.7 +/- 9.9 and 17.4 +/- 8.0 ).WBC
(8100 +/- 2100/[mm.sup.3]) and fibronectin (463.2 +/- 61.3 mg/dL) were
acceptable but in the upper normal range.
Corresponding findings after supplementation of flaxseed were 10.6
+/-
6.2 mg/L, 14.3 +/- 9.2 mg/L, 7300 +/- 1800/[mm.sup.3] and 412.8 +/-
38.6 respectively (P<0.05).
No change during the control period regarding baseline occurred when
placebo was randomized to be given first; however, when it followed
omega-3 supplementation, CRP and SAA recovered, whereas WBC and
fibronection remained depressed during those 2 weeks (7500 +/- 2100/
[mm.sup.3] and 393.2 +/- 75.8 mg/dL,
P<0.05).
CONCLUSIONS:
1) Various inflammatory markers were elevated in the studied
population, although not necessarily exceeding the normal range; 2)
Significant reduction could be demonstrated; 3) Some persistent
effects of flaxseed supplement 2 weeks after discontinuation were
observed.
------------------


Who loves ya.
Tom


Jesus Was A Vegetarian!
http://tinyurl.com/2r2nkh


Man Is A Herbivore!
http://tinyurl.com/a3cc3


DEAD PEOPLE WALKING
http://tinyurl.com/zk9fk



> On Sep 27, 4:46 pm, "ironjust...(a)aol.com" <ironjust...(a)aol.com>
> wrote:Team from University of Leicester reveal how the protein PPAR
> gamma binds to 8 fatty acids <<
>
> http://tinyurl.com/3gc6s8
>
> Therefore, this hypothesis bridges the concept of natural PPAR
> agonists and the use of structural information in designing new drugs
> against diabetes and metabolic syndrome.
> The derivatives may also be used as anti-inflammatory and anticancer
> agents.
>
> PMID: 18355413
> -----------------------
>
> Sci. STKE, 28 November 2006
> Vol. 2006, Issue 363, p. tw401
> [DOI: 10.1126/stke.3632006tw401]
>
> EDITORS' CHOICE
> Immunology
> Nitrated Fatty Acids as Signaling Molecules
> L. Bryan Ray
>
> Science, Science’s STKE, AAAS, Washington, DC 20005, USA
>
> Some fatty acid derivatives, like prostaglandins and thromboxanes, are
> well known signaling molecules.
> A more recently recognized, related class of molecules that could have
> similar functions includes the nitration products of unsaturated fatty
> acids (nitroalkenes) formed in nitric oxide (NO)-dependent oxidative
> reactions.
> In particular, the nitroalkene derivatives of linoleic acid (LNO2) and
> oleic acid (OA-NO2) are found in human plasma and are thought to
> regulate physiological functions in multiple cell types.
> Rather than binding to receptors, though, these molecules are proposed
> to act by mediating reversible nitroalkylation of glutathione or of
> Cys or His residues of proteins.
> Cui et al. now report experiments indicating that LNO2 and OA-NO2 may
> function as antiinflammatory agents.
> The authors applied concentrations of LNO2 and OA-NO2 similar to those
> found in human blood to cultured mouse macrophages and observed dose-
> dependent decreases in lipopolysaccharide (LPS)-induced cytokine
> secretion by the cells. The transcription factor NF-B has a central
> role in inflammatory responses, and treatment of macrophages with LNO2
> or OA-NO2 decreased activation of the transcription factor in response
> to LPS.
> Experiments with biotinylated LNO2, OA-NO2, LA (linoleic acid), and OA
> indicated that LNO2 and OA-NO2, but not LA or OA, associated with the
> p65 subunit of NF-B and appeared to modify p65 by covalent
> nitroalkylation.
> The nitroalkenes also inhibited adhesion of monocytes to endothelial
> cells in culture.
> The authors propose that nitroalkenes like LNO2 and OA-NO2 may prove
> to be an important class of signaling molecules influencing
> inflammatory processes.
>
> T. Cui, F. J. Schopfer, J. Zhang, K. Chen, T. Ichikawa, P. R. S.
> Baker, C. Batthyany, B. K. Chacko, X. Feng, R. P. Patel, A. Agarwal,
> B. A. Freeman, Y. E. Chen, Nitrated fatty acids: Endogenous anti-
> inflammatory signaling mediators. J. Biol. Chem. 281, 35686-35698
> (2006). [Abstract] [Full Text]
>
> Citation: L. B. Ray, Nitrated Fatty Acids as Signaling Molecules. Sci.
> STKE 2006, tw401 (2006).
>
> University of Leicester
>
> Who loves ya.
> Tom
>
> Jesus Was A Vegetarian!http://tinyurl.com/2r2nkh
>
> Man Is A Herbivore!http://tinyurl.com/a3cc3
>
> DEAD PEOPLE WALKINGhttp://tinyurl.com/zk9fk
>
>
>
> > Discovery offers new understanding of diabetes drug target
> > September 26, 2008
>
> > Team from University of Leicester reveal how the protein PPAR gamma
> > binds to 8 fatty acids
>
> > Scientists at the University of Leicester have published findings
> > about a new advance in the study of major diabetes drug target.
>
> > The advance - described by the researchers as 'very significant' -
> > could lead to new drugs being developed to target a protein that plays
> > a critical role in controlling the way the body breaks down sugar.
>
> > Professor John Schwabe and his team from the University of Leicester
> > Department of Biochemistry (together with teams from Japan and
> > Hungary) have been studying the protein, PPAR gamma. PPAR gamma is a
> > major drug target for the treatment of type 2 diabetes. Although it
> > was known how drugs are able to activate this protein, until this
> > study, using the sophisticated technique of X-ray Crystallography, it
> > was not clear how PPAR gamma is naturally activated in the body.
>
> > X-ray Crystallography is the principal method by which the detailed 3-
> > dimensional structures of molecules - especially the molecules of
> > living systems - have been discovered. It is achieved by firing X-rays
> > at the target and creating its structures by analysing how the x-rays
> > scatter into many different directions.
>
> > Through this method, the Leicester team have shown how PPAR gamma
> > binds to eight different fatty acids, derived in part from what we
> > eat. They found that many of these acids joined irreversibly with the
> > protein and led to its long term activation. They have also shown that
> > sometimes two fatty acids bind simultaneously, which might mean that
> > PPAR gamma could be targeted by a mixture of drugs.
>
> > Professor John Schwabe, who led the Leicester project with his team,
> > including Dr Toshimasa Itoh and Dr Louise Fairall, said: "The finding
> > that natural activators for PPAR gamma couple irreversibly to the PPAR
> > gamma receptor dramatically changes our understanding of how this
> > receptor is activated.
>
> > "It may also allow for the design of novel pharmaceuticals that give
> > longer term activation of PPAR gamma, at lower doses, without some of
> > the side effects of the current generation of drugs."
>
> > Professor Schwabe said: "PPAR gamma is a critical player in the
> > increasingly prevalent metabolic disease of type 2 diabetes which
> > affects more than 180 million people worldwide (World Health
> > Organisisation) and in the UK alone costs the NHS £9.6 million every
> > day.
>
> > "PPARgamma is activated by two widely prescribed anti-diabetic
> > insulin- sensitising drugs, Actos and Avandia. However the identity of
> > the natural activators for PPAR gamma has remained unclear.
>
> > "Our breakthrough is important because it reveals for the first time
> > that how this protein is activated by naturally-occuring fatty acids.
> > This knowledge will help in the design of future novel pharmaceutical
> > agents."
>
> > University of Leicester
>
> > Who loves ya.
> > Tom
>
> > Jesus Was A Vegetarian!http://tinyurl.com/2r2nkh
>
> > Man Is A Herbivore!http://tinyurl.com/a3cc3
>
> > DEAD PEOPLE WALKINGhttp://tinyurl.com/zk9fk- Hide quoted text -
>
> - Show quoted text -